Ri NA

Date of Birth: 10.09.1985

Work Address: Institute of Cytology and Genetics, Novosibirsk, 630090, Russia (http://www.bionet.nsc.ru/)

Telephone: +7 (383) 363 49 22

Fax: +73833331278

Email: seahourse@mail.ru

Languages: Russian and English.

Work Experience and Current Position:

  • 2007 – present PhD student, Laboratory Assistant, Laboratory of molecular-genetic systems, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.
  • 2005 – 2007 Diploma student, Novosibirsk State University, Novosibirsk, Russian Federation
  • 2002 – 2005 Research student, Novosibirsk State University, Novosibirsk, Russian Federation

Skills:

  1. Bioinformatics methods – gene and association network reconstruction in Pajek and GeneNetStudio and AndVisio.
  2. Mathematical methods – numerical solution and analysis of differential equations in Mathematic and «STEP+» software
  3. Computational methods – windows, MS Office (Word, Excel, PowerPoint), Adobe (Acrobat, Photoshop), Perl and C++.
  4. Molecular biology methods – PCR, electrophoresis, DNA preparation and sequencing, measurement of optical density, titration.

Research Interests:
Systems biology, mathematical modeling of biological systems, modeling of dynamical systems, enzyme kinetics, gene regulation of Escherichia coli metabolism, respiration.


Degrees:

2007

Diploma:

M. Sc.in Biology (Informational biology)

Title: Modelling of influenza virus A ontogenesis in the sensitive cell

Advisor: Dr. Khlebodarova T.M and Dr. Likhoshvai V.A

Novosibirsk State University, Novosibirsk, Russian Federation


Education Background:

2002 – 2007 Novosibirsk State University, Novosibirsk, Russian Federation.
2005 – Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.


Participation in Conferences and Workshops:

2011:

  • VI Moscow International Congress “Biotechnology: state of the art and prospects of development”, Moscow, Russia, March 21 – 25, 2011, poster presentation.

2010:

  • The Seventh International Conference on Bioinformatics of Genome Regulation and Structure and Systems Biology (BGRS\SB_2010), Novosibirsk, Russia, June 20 – 27, 2010, poster presentations.

2007:

  • The XLV International Scientific Student’s Conference “The Student and scientific and Technical Progress”, Novosibirsk, Russia, April 10 – 12, 2007, oral presentation

2006:

  • The 5th International Conference on Bioinformatics of Genome Regulation and Structure, Novosibirsk, Russia, 2006, poster presentations.

Teaching:


Grants:


Patents:


Papers:

2009:

  • Bajan SI, Kashevarova (Ri) NA, Khlebodarova TM, Likhoshvai VA, Kolchanov NA A mathematical model of intracellular multiplication of influenza virus.// Biophysics, 2009. V.54, № 6, pp. 1066-1080.

Abstracts:

2011:

  • Akberdin I.R., Kazantsev F.V., Ree M.T., Ree N.A., Timonov V.S., Oshchepkova E.A., Ratushny A.V., Khlebodarova T.M., Likhoshvai V.A. MGSmodelsDB – a new database of mathematical models of Escherichia coli cell subsystems//Proceedings of the VI Moscow International Congress “Biotechnology: state of the art and prospects of development”, Moscow, Russia,Vol. 2, pp. 397-398.

2010:

  • Kazantsev, I.R. Aberdin, M.T. Ree, N.A. Ree, K.D. Bezmaternyh, V.A.Likhoshvai MGSmodelsDB – THE DATABASE FOR STORING MATHEMATICAL MODELS OF MOLECAR GENTIC SYSTEMS // Seven international conference on bioinformatics of genome regulation and structure (BGRS/SB_2010), Novosibirsk, 2010, p. 129.

2007:

  • Kashevarova (Ri) N.A. Modeling ontogenesis of influenza virus type A in the sensitive cell. // The XLV International Scientific Student’s Conference “The Student and scientific and Technical Progress”, Novosibirsk, Russia, April 10-12, 2007

2006:

  • Akberdin I.R., Kashevarova (Ri) N.A., Khlebodarova T.M., Bazhan S.I., Likhoshvai V.A. A mathematical model for the Influenza virus life cycle.// Proceedings of the 5th International Conference on Bioinformatics of Genome Regulation and Structure, Novosibirsk, Russia, 2006, Vol. 2, pp.105-109.