Ri NA
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Date of Birth: 10.09.1985 Work Address: Institute of Cytology and Genetics, Novosibirsk, 630090, Russia (http://www.bionet.nsc.ru/) Telephone: +7 (383) 363 49 22 Fax: +73833331278 Email: [email protected] Languages: Russian and English. |
Work Experience and Current Position:
- 2007 – present PhD student, Laboratory Assistant, Laboratory of molecular-genetic systems, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.
- 2005 – 2007 Diploma student, Novosibirsk State University, Novosibirsk, Russian Federation
- 2002 – 2005 Research student, Novosibirsk State University, Novosibirsk, Russian Federation
Skills:
- Bioinformatics methods – gene and association network reconstruction in Pajek and GeneNetStudio and AndVisio.
- Mathematical methods – numerical solution and analysis of differential equations in Mathematic and «STEP+» software
- Computational methods – windows, MS Office (Word, Excel, PowerPoint), Adobe (Acrobat, Photoshop), Perl and C++.
- Molecular biology methods – PCR, electrophoresis, DNA preparation and sequencing, measurement of optical density, titration.
Research Interests:
Systems biology, mathematical modeling of biological systems, modeling of dynamical systems, enzyme kinetics, gene regulation of Escherichia coli metabolism, respiration.
Degrees:
2007
Diploma:
M. Sc.in Biology (Informational biology)
Title: Modelling of influenza virus A ontogenesis in the sensitive cell
Advisor: Dr. Khlebodarova T.M and Dr. Likhoshvai V.A
Novosibirsk State University, Novosibirsk, Russian Federation
Education Background:
2002 – 2007 Novosibirsk State University, Novosibirsk, Russian Federation.
2005 – Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russian Federation.
Participation in Conferences and Workshops:
2011:
- VI Moscow International Congress “Biotechnology: state of the art and prospects of development”, Moscow, Russia, March 21 – 25, 2011, poster presentation.
2010:
- The Seventh International Conference on Bioinformatics of Genome Regulation and Structure and Systems Biology (BGRS\SB_2010), Novosibirsk, Russia, June 20 – 27, 2010, poster presentations.
2007:
- The XLV International Scientific Student’s Conference “The Student and scientific and Technical Progress”, Novosibirsk, Russia, April 10 – 12, 2007, oral presentation
2006:
- The 5th International Conference on Bioinformatics of Genome Regulation and Structure, Novosibirsk, Russia, 2006, poster presentations.
Teaching:
Grants:
Patents:
Papers:
2009:
- Bajan SI, Kashevarova (Ri) NA, Khlebodarova TM, Likhoshvai VA, Kolchanov NA A mathematical model of intracellular multiplication of influenza virus.// Biophysics, 2009. V.54, № 6, pp. 1066-1080.
Abstracts:
2011:
- Akberdin I.R., Kazantsev F.V., Ree M.T., Ree N.A., Timonov V.S., Oshchepkova E.A., Ratushny A.V., Khlebodarova T.M., Likhoshvai V.A. MGSmodelsDB – a new database of mathematical models of Escherichia coli cell subsystems//Proceedings of the VI Moscow International Congress “Biotechnology: state of the art and prospects of development”, Moscow, Russia,Vol. 2, pp. 397-398.
2010:
- Kazantsev, I.R. Aberdin, M.T. Ree, N.A. Ree, K.D. Bezmaternyh, V.A.Likhoshvai MGSmodelsDB – THE DATABASE FOR STORING MATHEMATICAL MODELS OF MOLECAR GENTIC SYSTEMS // Seven international conference on bioinformatics of genome regulation and structure (BGRS/SB_2010), Novosibirsk, 2010, p. 129.
2007:
- Kashevarova (Ri) N.A. Modeling ontogenesis of influenza virus type A in the sensitive cell. // The XLV International Scientific Student’s Conference “The Student and scientific and Technical Progress”, Novosibirsk, Russia, April 10-12, 2007
2006:
- Akberdin I.R., Kashevarova (Ri) N.A., Khlebodarova T.M., Bazhan S.I., Likhoshvai V.A. A mathematical model for the Influenza virus life cycle.// Proceedings of the 5th International Conference on Bioinformatics of Genome Regulation and Structure, Novosibirsk, Russia, 2006, Vol. 2, pp.105-109.